PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.6VX3K
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 687aa    MW: 77651.2 Da    PI: 5.3309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.6VX3KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.00064965272055
                  HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  f  L++ +P++       ++K++iL  +++Y+k+L+
  Aradu.6VX3K 496 FKILKSSIPHP----ISEVEKISILGDTIKYLKELE 527
                  78899999999....789***************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142155.5E-4616226IPR025610Transcription factor MYC/MYB N-terminal
Gene3DG3DSA:4.10.280.101.5E-6489545IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-5495550IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    Send to blast
MASSWSPKHE KMQKSLSTQL AVAVRSVQWS YGIFWAPSTT QEGVLEWREG YYNGDIKTMK  60
TVQTTMEIKN DKIGVQRSEQ LKELYKFLLV GESDPQTKRP SAALSPEDLS DSEWYYLVCM  120
SFVFYPNQSL PGRALEIGET IWLCNAQYAD SKVFSRSLLA KSASIQQKEI LSDHYIMAVT  180
KISMFILCFK PVFQTVVCFP YLGGVIEIGT TELVPEDPNL IQHVKACLLE FSKPICSDKS  240
SSALNKPDDD KLQPCSNGEH VLVDTKVLEY SCSPAEEIKL DQDPIKELQE DSNMDSPDGC  300
SNGCEHNCRV GESMVEAINN GGPSSQVHFM DDDDALSNGA PDSLSSCDCL SEASENRGKA  360
SKDVQLIRGI QSFNHLNRSS LDAAASDEHL SYTRILSALL GRSSAFKQNP YASNSNCKSS  420
FVKWKKGGIC EQNRLRLEQS LLKKTLFTVP LMHRSFSSIK SMKENETKEW TNRLENADDK  480
FRENVLSDKI RETGNFKILK SSIPHPISEV EKISILGDTI KYLKELETRV EELESYMDMA  540
DSEARTKRKC PDMLEQISDN YEARKVYNKG MRKPWMMNKR KACDIDEKNI EEIDRFVVSK  600
EDNNKPLDVK VNMKEQEVLI EMQCPYREYI LHDIMDAINN LHLDAYSVES STTEGVLTLT  660
LKSKFRGTAT APLGMIKEAL WKVSGNL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015947391.10.0PREDICTED: transcription factor EGL1 isoform X1
TrEMBLI1KIA80.0I1KIA8_SOYBN; Uncharacterized protein
STRINGGLYMA07G07740.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24443463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.31e-122bHLH family protein